ParseReaction: Parser for the description strings of certain...
In y1zhou/brendaDb: The BRENDA Enzyme Database
View source: R/parse-reaction.R
ParseReaction R Documentation
Parser for the description strings of certain reaction-related fields.
Description
This parser works for the fields substrate.product and
natural.substrate.product.
Usage
ParseReaction(description, acronym)
Arguments
description
A description string from one of the entries.
acronym
The acronym of the field. Can be found with ShowFields().
Details
The reversibility of the reactions are wrapped in ; substrates
and products are separated by "="; commentaries on substrates are wrapped in
"()", and commentaries on products are wrapped in "||".
Value
A tibble with columns: proteinID, substrate, product,
commentarySubstrate, commentaryProduct, fieldInfo and refID
y1zhou/brendaDb documentation built on Dec. 12, 2022, 3:43 a.m.
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View source: R/parse-reaction.R
| ParseReaction | R Documentation |
Parser for the description strings of certain reaction-related fields.
Description
This parser works for the fields substrate.product and
natural.substrate.product.
Usage
ParseReaction(description, acronym)
Arguments
description |
A description string from one of the entries. |
acronym |
The acronym of the field. Can be found with |
Details
The reversibility of the reactions are wrapped in ; substrates and products are separated by "="; commentaries on substrates are wrapped in "()", and commentaries on products are wrapped in "||".
Value
A tibble with columns: proteinID, substrate, product,
commentarySubstrate, commentaryProduct, fieldInfo and refID
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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