corr_volcano_ylim: corr_volcano_ylim Volcano plot for correlation coefficients...
In yzeng-lol/meeqtl: The package performs CpG sits methylation dependent eQTL (me_eQTL) analysis
Description
Usage
Arguments
Author(s)
Examples
Description
corr_volcano_ylim
Volcano plot for correlation coefficients and p values. To deal with outliers
are with extreme p values, therefore if(y > ylim)y = ylim
Usage
1
corr_volcano_ylim(cor_r, cor_p, y_lim, name, r_c = 0.3, p_c = 0.05)
Arguments
cor_r
A numeric vector of correlation coefficients
cor_p
A numeric vector of correlation p-values
y_lim
The up limitation of the y
name
Name of output PNG figure
r_c
The absuloate cutoff of correlation coefficient, default = 0.3
p_c
The cor.test p-value cutoff, default = 0.05
Author(s)
yzeng
Examples
1
2
3
cor_r <- runif(1000, -1, 1)
cor_p <- runif(1000, 0, 1)
corr_volcano_ylim(cor_r, cor_p, 2, "test_corr_volcano_ylim_plot.png")
yzeng-lol/meeqtl documentation built on Dec. 23, 2021, 9:10 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Author(s) Examples
Description
corr_volcano_ylim Volcano plot for correlation coefficients and p values. To deal with outliers are with extreme p values, therefore if(y > ylim)y = ylim
Usage
1 | corr_volcano_ylim(cor_r, cor_p, y_lim, name, r_c = 0.3, p_c = 0.05)
|
Arguments
cor_r |
A numeric vector of correlation coefficients |
cor_p |
A numeric vector of correlation p-values |
y_lim |
The up limitation of the y |
name |
Name of output PNG figure |
r_c |
The absuloate cutoff of correlation coefficient, default = 0.3 |
p_c |
The cor.test p-value cutoff, default = 0.05 |
Author(s)
yzeng
Examples
1 2 3 | cor_r <- runif(1000, -1, 1)
cor_p <- runif(1000, 0, 1)
corr_volcano_ylim(cor_r, cor_p, 2, "test_corr_volcano_ylim_plot.png")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.