#' isoseqId
#'
#' @param roi
#' @param outputDir
#'
#' @return
#' @export
#'
#' @examples
isoseqId = function( roi , outputDir )
{
STAR2bSMRT.dir = system.file(package = "STAR2bSMRT")
func = paste0("source " , STAR2bSMRT.dir , "/data/isoseqId.sh")
output = paste0(outputDir,"/alignments.id")
sh = paste( func , roi , output )
if( !file.exists(output) ) runSH(sh)
read.table( output , sep="\t" , header=T )
}
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