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SeqCNVCBS: Scan Statistics for CNV Detection with CBS
This package is for the use of detecting Copy Number Variation (CNV) using sequencing data. Matched-samples of control and case (normal and tumor) are required. The algorithm uses a scan statistics to detect windows of rate differences in two non-homogeneous Poisson Processes.
Getting started
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Package details |
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| Author | Jeremy J. Shen, Nancy R. Zhang |
| Maintainer | Jeremy J. Shen <jqshen@stanford.edu> |
| License | GPL-2 |
| Version | 1.0 |
| Package repository | View on R-Forge |
| Installation |
Install the latest version of this package by entering the following in R:
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