SeqCNVCBS: Scan Statistics for CNV Detection with CBS
Version 1.0

This package is for the use of detecting Copy Number Variation (CNV) using sequencing data. Matched-samples of control and case (normal and tumor) are required. The algorithm uses a scan statistics to detect windows of rate differences in two non-homogeneous Poisson Processes.

Package details

AuthorJeremy J. Shen, Nancy R. Zhang
MaintainerJeremy J. Shen <[email protected]>
LicenseGPL-2
Version1.0
Package repositoryView on R-Forge
Installation Install the latest version of this package by entering the following in R:
install.packages("SeqCNVCBS", repos="http://R-Forge.R-project.org")

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SeqCNVCBS documentation built on May 31, 2017, 5:11 a.m.