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This package is for the use of detecting Copy Number Variation (CNV) using sequencing data. Matched-samples of control and case (normal and tumor) are required. The algorithm uses a scan statistics to detect windows of rate differences in two non-homogeneous Poisson Processes.
Package details |
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Author | Jeremy J. Shen, Nancy R. Zhang |
Maintainer | Jeremy J. Shen <jqshen@stanford.edu> |
License | GPL-2 |
Version | 1.0 |
Package repository | View on R-Forge |
Installation |
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