pindel: DNA distance model incorporating alignment gaps

Description Usage Arguments Value Author(s) See Also

View source: R/pindel.R

Description

Calculates the p-distance between sequences, incorporating gaps as a fifth character

Usage

1
pindel(DNAbin, proportion = TRUE, indelmod = "indel")

Arguments

DNAbin

A ‘DNAbin’ object.

proportion

Something I'll need to figure out later

indelmod

Something to do with indels.

Value

A distance matrix

Author(s)

Samuel Brown <s_d_j_brown@hotmail.com>

See Also

dist.dna


spiderDev documentation built on May 2, 2019, 5:23 p.m.

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