IDunknown: Identifies unknown sequences by comparison against a local...
In spiderDev: Species Identity and Evolution in R--development

Description Usage Arguments Details Value Author(s) See Also Examples

Identification of unknown sequences by comparison against a local library of sequences of known identity.

1	IDunknown(unknown, known)

`unknown`	A ‘DNAbin’ object containing unknown sequences.
`known`	A ‘DNAbin’ object containing the library of known sequences.

This function is in VERY early stages of development. So early in fact, that it doesn't do anything at this stage.

This function requires that the unknown sequences are correctly aligned with respect to the local library. For a function that can be used without alignment, see .......... (function not made yet).

A vector with the species index of the identification.

Samuel Brown <s_d_j_brown@hotmail.com>

For more information on some of the different matching criteria see: nearNeighbour, monophyly

## Not run: 
data(dolomedes)

#Simulate a dataset of unknown specimens
set.seed(12354)
unknown <- dolomedes[sample(1:33, 5), ]
attr(unknown, "dimnames")[[1]] <- paste("unkow", 1:5, sep="")


IDunknown(unknown, dolomedes)


## End(Not run)