drawDigestionFragmentHistogram: Visualize digestion fragments with a histogram
In Basic4Cseq: Basic4Cseq: an R/Bioconductor package for analyzing 4C-seq data

Description Usage Arguments Value Author(s) Examples

This function is a small convenience function to plot the results of simulateDigestion as a histogram. Minimum and maximum fragment lengths can be specified to visualize a specified interval of the fragment data.

1	drawDigestionFragmentHistogram(fragments, minLength = 0, maxLength = 10000)

`fragments`	Fragment data to visualize (data frame with lengths and corresponding frequencies)
`minLength`	Minimum fragment length to visualize
`maxLength`	Maximum fragment length to visualize

Histogram plot of the fragment data

Carolin Walter

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    shortTestGenome = "ATCCATGTAGGCTAAGTACACATGTTAAGGTACAGTACAATTGCACGATCAT"
    fragments = simulateDigestion("catg", "gtac", shortTestGenome)
    drawDigestionFragmentHistogram(fragments)