giveEnzymeSequence: Provide the corresponding enzyme sequence for an enzyme name
In Basic4Cseq: Basic4Cseq: an R/Bioconductor package for analyzing 4C-seq data

Description Usage Arguments Value Note Author(s) References Examples

This function is a small convenience function that reads in a prepared file with restriction enzyme sequence names and sequences. giveEnzymeSequence then provides restriction enzyme sequences for the example enzymes listed in van de Werken et al's 4Cseqpipe data base.

1	giveEnzymeSequence(fileNameDatabase, enzymeName)

`fileNameDatabase`	File name of the prepared enzyme database
`enzymeName`	Name of the enzyme for which the sequence is to be returned

Character string with the restriction enzyme sequence

For any custom-made enzyme list it is assumed that there are no duplicate enzyme names in the database.

Carolin Walter

van de Werken, H., Landan, G., Holwerda, S., et al. (2012): Robust 4C-seq data analysis to screen for regulatory DNA interactions, Nature Methods, 9, 969-971.