Files in BayesSpace

Clustering and Resolution Enhancement of Spatial Transcriptomes

NEWS.md README.md R/enhanceFeatures.R R/readVisium.R R/RcppExports.R R/utils.R R/BayesSpace.R R/qTune.R R/mcmcChain.R R/spatialCluster.R R/spatialPlot.R R/spatialPreprocess.R R/spatialEnhance.R vignettes/BayesSpace.Rmd man/qTune.Rd man/dot-make_subspot_coldata.Rd man/dot-select_subspot_positions.Rd man/dot-make_spot_vertices.Rd man/dot-init_cluster.Rd man/dot-make_vertices.Rd man/spatialPlot.Rd man/dot-clean_chain.Rd man/dot-prepare_inputs.Rd man/mcmcChain.Rd man/exampleSCE.Rd man/Mode.Rd man/dot-flatten_matrix_list.Rd man/dot-select_spot_positions.Rd man/featurePlot.Rd man/dot-read_chain.Rd man/find_neighbors.Rd man/readVisium.Rd man/getRDS.Rd man/clusterPlot.Rd man/dot-adjust_hex_centers.Rd man/cluster.Rd man/BayesSpace.Rd man/dot-infer_param_dims.Rd man/dot-make_square_spots.Rd man/spatialCluster.Rd man/dot-make_hex_spots.Rd man/deconvolve.Rd man/dot-make_subspot_offsets.Rd man/dot-compute_interspot_distances.Rd man/spatialEnhance.Rd man/spatialPreprocess.Rd man/dot-make_index_names.Rd man/dot-make_triangle_subspots.Rd man/dot-bsData.Rd man/enhanceFeatures.Rd man/dot-find_neighbors.Rd tests/testthat.R tests/testthat/test-enhanceFeatures.R tests/testthat/test-mcmcChain.R tests/testthat/test-find_neighbors.R inst/doc/BayesSpace.Rmd inst/doc/BayesSpace.R inst/logo/hex_sticker.Rmd inst/extdata/README.md