Description Usage Arguments Value Author(s) Examples

The function compares the following parameters of two networks: diameter, average degree, degree exponent, average path length and plots the cumulative degree distributions. The networks have to be connected components.

1 | ```
compareNetworks(network1, network2, plot=TRUE)
``` |

`network1` |
Network |

`network2` |
Second network in |

`plot` |
Boolean value, whether to plot the cumulative degree distributions. |

A vector of network parameters is returned:

`diam.network1` |
Network diameter |

`diam.network2` |
Diameter of the subnetwork |

`av.degree.network1` |
Average degree of the network |

`av.degree.network2` |
Average degree of the subnetwork |

`degree.exponent.network1` |
Degree exponent of the network |

`degree.exponent.network2` |
Degree exponent of the subnetwork |

`av.path.length.network1` |
Average path lenght of the network |

`av.path.length.network2` |
Average path length of the subnetwork |

Daniela Beisser

1 2 3 4 5 | ```
library(DLBCL)
data(interactome)
subnet1 <- largestComp(subNetwork(nodes(interactome)[1:100], interactome))
subnet2 <- largestComp(subNetwork(nodes(interactome)[101:200], interactome))
compareNetworks(network1=subnet1, network2=subnet2)
``` |

BioNet documentation built on Nov. 17, 2017, 9:15 a.m.

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