Files in BioNet
Routines for the functional analysis of biological networks

NAMESPACE
DESCRIPTION
inst/CITATION
inst/extdata/cytoscape.sif
inst/extdata/lymphoma_nodes_001.txt.0.hnz
inst/extdata/ALL_nodes_001.txt.0.hnz
inst/extdata/ALL_edges_001.txt.0.hnz
inst/extdata/ALL_n_resample.txt.0.hnz
inst/extdata/lymphoma_edges_001.txt.0.hnz
inst/extdata/weight.EA
inst/extdata/ALL_cons_n.txt.0.hnz
inst/extdata/n.weight.NA
inst/doc/Tutorial.Rnw
inst/doc/Tutorial.pdf inst/doc/Tutorial.R man/makeNetwork.Rd man/plot3dModule.Rd man/aggrPvals.Rd man/fdrThreshold.Rd man/scoreOffset.Rd man/rmSelfLoops.Rd man/resamplingPvalues.Rd man/fitBumModel.Rd man/writeHeinzNodes.Rd man/plotLLSurface.Rd man/loadNetwork.sif.Rd man/print.bum.Rd man/bumOptim.Rd man/subNetwork.Rd man/summary.bum.Rd man/writeHeinzEdges.Rd man/sortedEdgeList.Rd man/piUpper.Rd man/readHeinzGraph.Rd man/scoreNodes.Rd man/scoreFunction.Rd man/save3dModule.Rd man/permutateNodes.Rd man/pvaluesExample.Rd man/fbum.Rd man/plot.bum.Rd man/getCompScores.Rd man/mapByVar.Rd man/scanFDR.Rd man/plotModule.Rd man/largestScoreComp.Rd man/saveNetwork.Rd man/runHeinz.Rd man/hist.bum.Rd man/loadNetwork.tab.Rd man/runFastHeinz.Rd man/readHeinzTree.Rd man/largestComp.Rd man/getEdgeList.Rd man/writeHeinz.Rd man/consensusScores.Rd man/fbumLL.Rd man/BioNet-package.Rd man/compareNetworks.Rd
build/vignette.rds
vignettes/Tutorial-3dplot.pdf vignettes/bum2.pdf vignettes/cytoscape.pdf vignettes/bum1.pdf
vignettes/Tutorial.Rnw
vignettes/prec_recall_large.pdf vignettes/prec_recall_small.pdf
vignettes/Tutorials.bib
data/pvaluesExample.rda
R/IO.R R/Resampling.R R/Statistics.R R/HeinzUtils.R R/Graph.R R/MAUtils.R R/Plots.R
BioNet documentation built on Nov. 17, 2017, 9:15 a.m.