choose_perplexity: Choose perplexity depending on number of cells for Tsne
In ChromSCape: Analysis of single-cell epigenomics datasets with a Shiny App
Description
Usage
Arguments
Value
View source: R/preprocessing_filtering_reduction.R
Description
Choose perplexity depending on number of cells for Tsne
Usage
1
choose_perplexity(dataset)
Arguments
dataset
A matrix of features x cells (rows x columns)
Value
A number between 5 and 30 to use in Rtsne function
ChromSCape documentation built on Nov. 8, 2020, 6:57 p.m.
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Description Usage Arguments Value
View source: R/preprocessing_filtering_reduction.R
Description
Choose perplexity depending on number of cells for Tsne
Usage
1 | choose_perplexity(dataset)
|
Arguments
dataset |
A matrix of features x cells (rows x columns) |
Value
A number between 5 and 30 to use in Rtsne function
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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