Description Usage Arguments Value
View source: R/preprocessing_filtering_reduction.R
Define the features on which reads will be counted
1 | define_feature(ref, peak_file, n_bins, bin_width, geneTSS, aroundTSS)
|
ref |
Reference genome |
peak_file |
A bed file if counting on peaks |
n_bins |
A number of bins if divinding genome into fixed number of bins |
bin_width |
A number of bins if divinding genome into fixed width bins |
geneTSS |
A logical indicating if feature should be counted around genes TSS instead |
aroundTSS |
Region to take in account around genes TSS |
A GRanges object
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