mvPerLinesHistoPerCondition_HC: Bar plot of missing values per lines and per condition

In DAPAR: Tools for the Differential Analysis of Proteins Abundance with R

Description

This method plots a bar plot which represents the distribution of the number of missing values (NA) per lines (ie proteins) and per conditions.

Usage

mvPerLinesHistoPerCondition_HC(
  qData,
  samplesData,
  indLegend = "auto",
  showValues = FALSE,
  palette = NULL
)

Arguments

qData	A dataframe that contains quantitative data.
samplesData	A dataframe where lines correspond to samples and columns to the meta-data for those samples.
indLegend	The indice of the column name's in pData() tab
showValues	A logical that indicates wether numeric values should be drawn above the bars.
palette	xxx

Value

A bar plot

Author(s)

Samuel Wieczorek

Examples

utils::data(Exp1_R25_pept, package='DAPARdata')
qData <- Biobase::exprs(Exp1_R25_pept)
samplesData <- Biobase::pData(Exp1_R25_pept)
mvPerLinesHistoPerCondition_HC(qData, samplesData, palette=(c('#AAAAAA', '#AAAAAA')))

DAPAR documentation built on April 11, 2021, 6 p.m.