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README.md
In DOSE: Disease Ontology Semantic and Enrichment analysis
DOSE: Disease Ontology Semantic and Enrichment analysis
This package implements five methods proposed by Resnik, Schlicker,
Jiang, Lin and Wang respectively for measuring semantic
similarities among DO terms and gene products. Enrichment analyses
including hypergeometric model and gene set enrichment analysis are also
implemented for discovering disease associations of high-throughput
biological data.
For details, please visit our project website,
https://guangchuangyu.github.io/software/DOSE.
Please cite the following article when using DOSE:
G Yu, LG Wang, GR Yan, QY He. DOSE: an R/Bioconductor package for
Disease Ontology Semantic and Enrichment analysis. Bioinformatics
2015,
31(4):608-609.
Citation
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DOSE documentation built on Nov. 8, 2020, 7:48 p.m.
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DOSE: Disease Ontology Semantic and Enrichment analysis
This package implements five methods proposed by Resnik, Schlicker, Jiang, Lin and Wang respectively for measuring semantic similarities among DO terms and gene products. Enrichment analyses including hypergeometric model and gene set enrichment analysis are also implemented for discovering disease associations of high-throughput biological data.
For details, please visit our project website, https://guangchuangyu.github.io/software/DOSE.
Please cite the following article when using DOSE:
G Yu, LG Wang, GR Yan, QY He. DOSE: an R/Bioconductor package for Disease Ontology Semantic and Enrichment analysis. Bioinformatics 2015, 31(4):608-609.
Citation
Download stats
Try the DOSE package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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