Description Usage Arguments Value Author(s) Examples
Pairwise semantic similarity for a list of gene clusters
1 | mclusterSim(clusters, measure = "Wang", combine = "BMA")
|
clusters |
A list of gene clusters |
measure |
one of "Wang", "Resnik", "Rel", "Jiang", and "Lin". |
combine |
One of "max", "avg", "rcmax", "BMA" methods, for combining semantic similarity scores of multiple DO terms associated with gene/protein. |
similarity matrix
Yu Guangchuang
1 2 3 4 5 |
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