compareClusterResult-class: Class "compareClusterResult" This class represents the...
In DOSE: Disease Ontology Semantic and Enrichment analysis
Description
Slots
Author(s)
See Also
Description
Class "compareClusterResult"
This class represents the comparison result of gene clusters by GO
categories at specific level or GO enrichment analysis.
Slots
compareClusterResultcluster comparing result
geneClustersa list of genes
funone of groupGO, enrichGO and enrichKEGG
gene2Symbolgene ID to Symbol
keytypeGene ID type
readablelogical flag of gene ID in symbol or not.
.callfunction call
termsimSimilarity between term
methodmethod of calculating the similarity between nodes
Author(s)
Guangchuang Yu https://guangchuangyu.github.io
See Also
DOSE documentation built on Nov. 8, 2020, 7:48 p.m.
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Description Slots Author(s) See Also
Description
Class "compareClusterResult" This class represents the comparison result of gene clusters by GO categories at specific level or GO enrichment analysis.
Slots
compareClusterResultcluster comparing result
geneClustersa list of genes
funone of groupGO, enrichGO and enrichKEGG
gene2Symbolgene ID to Symbol
keytypeGene ID type
readablelogical flag of gene ID in symbol or not.
.callfunction call
termsimSimilarity between term
methodmethod of calculating the similarity between nodes
Author(s)
Guangchuang Yu https://guangchuangyu.github.io
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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