Sc.phenomat.dynamic: Design of the Saccharomyces Cerevisiae salt stress DTA...
In DTA: Dynamic Transcriptome Analysis
Description
Usage
Format
Source
Description
The phenotype matrix Sc.phenomat.dynamic contains information about the experimental design. It is comprised of the filename, the type of RNA fraction measured (T, U or L), the labeling time, the replicate number and an additional number indicating the timecourse order.
Usage
1
Format
The phenomat is a matrix comprised of the file name, the type of RNA fraction mesasured (T, U or L, fraction column), the labeling time (time,timeframe column), the replicate number (nr column) and a number indicating the timecourse order (timecourse column). Rows in this matrix represent the individual experiments.
Source
C. Miller, B. Schwalb, K. Maier, D. Schulz, S. Duemcke, B. Zacher, A. Mayer, J. Sydow, L. Marcinowski, L. Doelken, D. E. Martin, A. Tresch, and P. Cramer. Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast. Mol Syst Biol, 7:458, 2011.
DTA documentation built on Nov. 8, 2020, 7:22 p.m.
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Description Usage Format Source
Description
The phenotype matrix Sc.phenomat.dynamic contains information about the experimental design. It is comprised of the filename, the type of RNA fraction measured (T, U or L), the labeling time, the replicate number and an additional number indicating the timecourse order.
Usage
1 |
Format
The phenomat is a matrix comprised of the file name, the type of RNA fraction mesasured (T, U or L, fraction column), the labeling time (time,timeframe column), the replicate number (nr column) and a number indicating the timecourse order (timecourse column). Rows in this matrix represent the individual experiments.
Source
C. Miller, B. Schwalb, K. Maier, D. Schulz, S. Duemcke, B. Zacher, A. Mayer, J. Sydow, L. Marcinowski, L. Doelken, D. E. Martin, A. Tresch, and P. Cramer. Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast. Mol Syst Biol, 7:458, 2011.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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