scatter: scatter

In ELMER: Inferring Regulatory Element Landscapes and Transcription Factor Networks Using Cancer Methylomes

Description

scatter

Usage

scatter(
  meth,
  exp,
  legend.title = "Legend",
  category = NULL,
  xlab = NULL,
  ylab = NULL,
  ylim = NULL,
  dots.size = 0.9,
  title = NULL,
  correlation = FALSE,
  color.value = NULL,
  lm_line = FALSE
)

Arguments

meth	A vector of number.
exp	A vector of number or matrix with sample in column and gene in rows.
legend.title	Plot legend title
category	A vector of sample labels.
xlab	A character specify the title of x axis.
ylab	A character specify the title of y axis.
ylim	y-axis limit i.e. c(0,25)
dots.size	Control dots size
title	A character specify the figure title.
correlation	Show person correlation values
color.value	A vector specify the color of each category, such as
lm_line	A logic. If it is TRUE, regression line will be added to the graph.

Value

A ggplot figure object

ELMER documentation built on Nov. 8, 2020, 4:59 p.m.