ecdf_list: The list with the ECDF's of the test statistic under the null...
In GeneAccord: Detection of clonally exclusive gene or pathway pairs in a cohort of cancer patients
Description
Usage
Format
Source
Description
This is a list whose entries are the empirical cumulative
distribution functions for different
number of patients that pairs can be mutated in.
Usage
1
Format
A list whose entries are the empirical cumulative
distribution functions. Entry 1 is set to NULL, because
GeneAccord does not test pairs that occur in just one patient.
Entry 2 then contains the ECDF of the test statistic
under the null hypothesis for the case that pairs are mutated
in two patients. Entry 3 contains the ECDF for the case
where pairs occur in three patients.
Source
The list was generated with the function
generate_ecdf_test_stat as demonstrated in
the vignette, just
that the following parameter was set as
num_pairs_sim = 100000.
GeneAccord documentation built on Nov. 8, 2020, 8:04 p.m.
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Description Usage Format Source
Description
This is a list whose entries are the empirical cumulative distribution functions for different number of patients that pairs can be mutated in.
Usage
1 |
Format
A list whose entries are the empirical cumulative distribution functions. Entry 1 is set to NULL, because GeneAccord does not test pairs that occur in just one patient. Entry 2 then contains the ECDF of the test statistic under the null hypothesis for the case that pairs are mutated in two patients. Entry 3 contains the ECDF for the case where pairs occur in three patients.
Source
The list was generated with the function
generate_ecdf_test_stat as demonstrated in
the vignette, just
that the following parameter was set as
num_pairs_sim = 100000.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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