getREACTOMEPATHList: Retrieve REACTOME path categories containing given genes

In GeneAnswers: Integrated Interpretation of Genes

Description

Function to retrieve REACTOME path_db IDs containing given genes.

Usage

getREACTOMEPATHList(geneVector)

Arguments

geneVector

an Entrez gene IDs vector

Details

geneVector should be a vector of Entrez IDs.

Value

return a REACTOME genes ID list, names of the list are REACTOME path IDs and elements are gene IDs.

Author(s)

Gang Feng, Pan Du and Simon Lin

References

Feng, G., Du, P., Krett, N., Tessel, M., Rosen, S., Kibbe, W.A. and Lin, S.M., 'A collection of bioconductor methods to visualize gene-list annotations', BMC Research Notes 2010, 3:10

See Also

getCategoryList

Examples

## Not run: a <- getREACTOMEPATHList(c('8772', '1017'))
## Not run: length(a)

GeneAnswers documentation built on Nov. 8, 2020, 4:53 p.m.