geneAnswersSort: Sort enrichmentInfo of a GeneAnswers instance

In GeneAnswers: Integrated Interpretation of Genes

Description

a function to sort enrichmentInfo data frame in GeneAnswers objects.

Usage

geneAnswersSort(x, sortBy = c("geneNum", "pvalue", "foldChange", "oddsRatio", "correctedPvalue"))

Arguments

x	a GeneAnswers instance
sortBy	sorted type

Details

sortBy could be one of "geneNum", "pvalue", "foldChange", "oddsRatio" and "correctedPvalue".

Value

return a new GeneAnswers instance with sorted by the specified type.

Author(s)

Gang Feng, Pan Du and Simon Lin

References

Feng, G., Du, P., Krett, N., Tessel, M., Rosen, S., Kibbe, W.A. and Lin, S.M., 'A collection of bioconductor methods to visualize gene-list annotations', BMC Research Notes 2010, 3:10

See Also

GeneAnswers-class

Examples

example(GeneAnswers)
xx <- geneAnswersSort(x, sortBy='correctedPvalue')

GeneAnswers documentation built on Nov. 8, 2020, 4:53 p.m.