readCounts-methods: Method readCounts

Description Usage Arguments Value See Also Examples

Description

Method readCounts

Usage

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readCounts(whippetDataSet)

## S4 method for signature 'whippetDataSet'
readCounts(whippetDataSet)

Arguments

whippetDataSet

whippetDataSet generated from readWhippetDataSet()

Value

whippet read count data.frame (originally from a whippet .psi file)

See Also

Other whippet data processing: coordinates, diffSplicingResults, filterWhippetEvents, formatWhippetEvents, junctions, readWhippetDIFFfiles, readWhippetDataSet, readWhippetJNCfiles, readWhippetPSIfiles, whippetTranscriptChangeSummary

Examples

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whippetFiles <- system.file("extdata","whippet/",
package = "GeneStructureTools")
wds <- readWhippetDataSet(whippetFiles)

readCounts <- readCounts(wds)

GeneStructureTools documentation built on Nov. 8, 2020, 6:04 p.m.