getCorr.JointUniquePairs: Extract a set of correlation objects from given...
In IdMappingAnalysis: ID Mapping Analysis

Description Usage Arguments Value Author(s) See Also Examples

Generate a list of correlation objects based on a given correlation object treated as a 'joint' object(i.e. produced through the pipeline JointIdMap->UniquePairs->Corr and a set of matches for a set of DBs stored in a JointUniquePairs object.

1 2	## S3 method for class 'JointUniquePairs' getCorr(this, corr, groups=NULL, full.group=FALSE, verbose=FALSE, ...)

`corr`	Corr object from which the Corr object(s) retrieved for each particular DB based on which the patricular Corr object is retrieved.
`groups`	Optional `character` vector of DB names encapsulated within the JointUniquePairs object defining the set of match groups to be used for retrieving the corresponding Corr objects. If `NULL` (default), all match groups within the given UniquePairsObject are used.
`full.group`	Determines if the resulting Corr object list should represent a full group. Default is `FALSE`.
`verbose`	if `TRUE` enables diagnostic messages. Default is `FALSE`.
`...`	Not used

Corr object or a list ofCorr objects with names corresponding to the names of particular match groups contained within the given JointUniquePairs object

Alex Lisovich, Roger Day

For more information see JointUniquePairs.

 # Create and plot the set of corrs for a given DB subset treating subset as a full group
 # and plot the correlation densities including union
 corrSet<- examples$jointUniquePairs$getCorr(examples$corr,
	groups=c("union", "NetAffx_Q", "DAVID_Q", "EnVision_Q"),
     full.group=TRUE, verbose=TRUE);
 Corr$plot(corrSet, title="");