getCounts.JointIdMap: Create an IdMapCounts object

In IdMappingAnalysis: ID Mapping Analysis

Description

Create an IdMapCounts object. A fail-safe way to create an IdMapCounts from the ID Map list obtained internally through the call to getIdMapList.JointIdMap method and therefore guaranteed to be properly aligned

Usage

## S3 method for class 'JointIdMap'
getCounts(this, idMapNames=NULL, verbose=FALSE, ...)

Arguments

idMapNames	Subset of ID Maps to be used to create IdCounts object. If NULL (default) all ID maps within the given object included.
verbose	If TRUE enables diagnostic messages. Default is FALSE.
...	Not used

Value

An IdMapCounts object containing information about the secondary ID counts for each primary ID for all ID Maps encapsulated within the given JointIdMap object

Author(s)

Alex Lisovich, Roger Day

See Also

For more information see JointIdMap.

Examples

 jointIdMap<-JointIdMap(examples$identDfList);
 cnts<-jointIdMap$getCounts();
 cnts[1:10,];
 

IdMappingAnalysis documentation built on Oct. 31, 2019, 3:30 a.m.