Method for objects of class LowMACA. It can show the results of the alignment procedure that has been performed on the LowMACA object
object of class LowMaca
A list containing the following elements:
ALIGNMENT an object of class data.frame containing the mapping of the position of the original amino acids to the consensus sequence
SCORE a list of two objects
DIST_MAT a matrix of the pairwise similarities between sequences as resulted after the multiple alignment (from 0% to 100%)
SUMMARY_SCORE a data.frame containing summary descriptives of the distance matrix
CLUSTAL an object of class "AAMultipleAlignment" as provided by Biostrings R package
df a dataframe containing the predicted consesus sequence and the trident conservation score at every position
Stefano de Pretis, Giorgio Melloni
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