Description Usage Arguments Value Examples

View source: R/runDiffVarAnalysis.R

Run differential variance analysis. This analysis can only be run with categorical
variables. This function relies on `varFit`

from missMethyl package.

1 2 |

`set` |
Matrix, |

`model` |
Model matrix or formula to get model matrix from |

`coefficient` |
Numeric with the coefficients used to make the groups. If NULL, all possible groups will be computed. |

`resultSet` |
Should results be encapsulated in a |

`betas` |
If |

`warnings` |
Should warnings be displayed? (Default:TRUE) |

`...` |
Further arguments passed to |

`MArrayLM`

or `resultSet`

with the result of the differential
variance analysis.

1 2 3 4 5 6 | ```
if (require(minfiData)){
mvalues <- getM(MsetEx)[1:100, ]
model <- model.matrix(~ Sample_Group, data = pData(MsetEx))
res <- runDiffVarAnalysis(mvalues, model)
res
}
``` |

MEAL documentation built on Nov. 1, 2018, 5:01 a.m.

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