exportResults: Exports results data.frames to csv files.

In MEAL: Perform methylation analysis

Description

Exports results to csv files. If more than one variable is present, subfolders with the name of the variable are created. For each variable, four files will be generated: probeResults.csv, dmrCateResults.csv, bumphunterResults.csv and blockFinderResults.csv

Usage

exportResults(
  object,
  dir = "./",
  prefix = NULL,
  fNames = c("chromosome", "start")
)

Arguments

object	ResultSet
dir	Character with the path to export.
prefix	Character with a prefix to be added to all file names.
fNames	Names of the columns of object fData that will be added to the results data.frame.

Value

Files are saved into the given folder.

Examples

if (require(minfiData)){
set <- ratioConvert(mapToGenome(MsetEx[1:10,]))
methyOneVar <- runPipeline(set, variable_names = "sex")
exportResults(methyOneVar)
}

MEAL documentation built on Feb. 3, 2021, 2 a.m.