MEDIPS: DNA IP-seq data analysis
Version 1.28.0

MEDIPS was developed for analyzing data derived from methylated DNA immunoprecipitation (MeDIP) experiments followed by sequencing (MeDIP-seq). However, MEDIPS provides functionalities for the analysis of any kind of quantitative sequencing data (e.g. ChIP-seq, MBD-seq, CMS-seq and others) including calculation of differential coverage between groups of samples and saturation and correlation analysis.

Package details

AuthorLukas Chavez, Matthias Lienhard, Joern Dietrich, Isaac Lopez Moyado
Bioconductor views ChIPSeq CopyNumberVariation Coverage CpGIsland DNAMethylation DifferentialExpression Genetics GenomeAnnotation Microarray Preprocessing QualityControl SequenceMatching Sequencing Visualization
MaintainerLukas Chavez <[email protected]>
LicenseGPL (>=2)
Package repositoryView on Bioconductor
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MEDIPS documentation built on May 31, 2017, 3:20 p.m.