PMID15897565: Patterns of gene expression that characterize long-term...
In MetaGxOvarian: Transcriptomic Ovarian Cancer Datasets
Description
Format
Details
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Description
A better understanding of the underlying biology of invasive serous ovarian cancer is critical for the development of early detection strategies and new therapeutics. The objective of this study was to define gene expression patterns associated with favorable survival.RNA from 65 serous ovarian cancers was analyzed using Affymetrix U133A microarrays. This included 54 stage III/IV cases (30 short-term survivors who lived <3 years and 24 long-term survivors who lived >7 years) and 11 stage I/II cases. Genes were screened on the basis of their level of and variability in expression, leaving 7,821 for use in developing a predictive model for survival. A composite predictive model was developed that combines Bayesian classification tree and multivariate discriminant models. Leave-one-out cross-validation was used to select and evaluate models.Patterns of genes were identified that distinguish short-term and long-term ovarian cancer survivors. The expression model developed for advanced stage disease classified all 11 early-stage ovarian cancers as long-term survivors. The MAL gene, which has been shown to confer resistance to cancer therapy, was most highly overexpressed in short-term survivors (3-fold compared with long-term survivors, and 29-fold compared with early-stage cases). These results suggest that gene expression patterns underlie differences in outcome, and an examination of the genes that provide this discrimination reveals that many are implicated in processes that define the malignant phenotype.Differences in survival of advanced ovarian cancers are reflected by distinct patterns of gene expression. This biological distinction is further emphasized by the finding that early-stage cancers share expression patterns with the advanced stage long-term survivors, suggesting a shared favorable biology.
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experimentData(eset):
Experiment data
Experimenter name: Berchuck A, Iversen ES, Lancaster JM, Pittman J, Luo J, Lee P, Murphy S, Dressman HK, Febbo PG, West M, Nevins JR, Marks JR.Patterns of gene expression that characterize long-term survival in advanced stage serous ovarian cancers. Clin Cancer Res. 2005 May 15; 11(10):3686-96.
Laboratory: Berchuck, Marks 2005
Contact information:
Title: Patterns of gene expression that characterize long-term survival in advanced stage serous ovarian cancers.
URL:
PMIDs: 15897565
Abstract: A 258 word abstract is available. Use 'abstract' method.
Information is available on: preprocessing
notes:
platform_title:
[HG-U133A] Affymetrix Human Genome U133A Array
platform_shorttitle:
Affymetrix HG-U133A
platform_summary:
hgu133a
platform_manufacturer:
Affymetrix
platform_distribution:
commercial
platform_accession:
GPL96
warnings:
These samples are a subset of PMID17290060.
version:
2015-09-22 20:17:53
featureData(eset):
An object of class 'AnnotatedDataFrame'
featureNames: 1007_s_at 1053_at ... AFFX-HUMISGF3A/M97935_MB_at
(20967 total)
varLabels: probeset gene EntrezGene.ID best_probe
varMetadata: labelDescription
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assayData: 20967 features, 63 samples
Platform type:
---------------------------
Available sample meta-data:
---------------------------
alt_sample_name:
Min. 1st Qu. Median Mean 3rd Qu. Max.
1761 1828 1907 2001 2032 2536
sample_type:
tumor
63
histological_type:
ser
63
primarysite:
ov
63
summarygrade:
high low NA's
25 37 1
summarystage:
early late
11 52
tumorstage:
1 2 3 4
7 4 48 4
grade:
1 2 3 4 NA's
2 35 24 1 1
age_at_initial_pathologic_diagnosis:
Min. 1st Qu. Median Mean 3rd Qu. Max.
33.00 52.50 59.00 59.21 67.00 79.00
os_binary:
long short NA's
24 28 11
debulking:
optimal suboptimal NA's
24 28 11
batch:
2002-09-20 2002-10-23 2002-11-12 2002-12-16 2002-12-21 2003-01-03 2003-05-30
15 9 10 1 3 11 13
2003-07-02
1
uncurated_author_metadata:
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1761///Cancer.Type: Early stage///AgeDx: 72///STAGE: IC///GRADE: 2///Debulking: ///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1762///Cancer.Type: Early stage///AgeDx: 52///STAGE: IA///GRADE: 3///Debulking: ///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1763///Cancer.Type: Early stage///AgeDx: 58///STAGE: IIC///GRADE: 2///Debulking: ///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1764///Cancer.Type: Early stage///AgeDx: 48///STAGE: IC///GRADE: 3///Debulking: ///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1765///Cancer.Type: Early stage///AgeDx: 45///STAGE: IA///GRADE: 2///Debulking: ///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1772///Cancer.Type: Long///AgeDx: 33///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1773///Cancer.Type: Long///AgeDx: 68///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1774///Cancer.Type: Long///AgeDx: 56///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1775///Cancer.Type: Long///AgeDx: 60///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1776///Cancer.Type: Long///AgeDx: 40///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1777///Cancer.Type: Long///AgeDx: 78///STAGE: IIIB///GRADE: 3///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1778///Cancer.Type: Long///AgeDx: 66///STAGE: IIIB///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1779///Cancer.Type: Long///AgeDx: 53///STAGE: IIIC///GRADE: 3///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1780///Cancer.Type: Long///AgeDx: 63///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1781///Cancer.Type: Long///AgeDx: 73///STAGE: IIIC///GRADE: 3///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1828///Cancer.Type: Short///AgeDx: 59///STAGE: IV///GRADE: 3///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1829///Cancer.Type: Short///AgeDx: 65///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1830///Cancer.Type: Short///AgeDx: 79///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1831///Cancer.Type: Short///AgeDx: 70///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1832///Cancer.Type: Short///AgeDx: 59///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1833///Cancer.Type: Short///AgeDx: 55///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1834///Cancer.Type: Short///AgeDx: 48///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1835///Cancer.Type: Short///AgeDx: 54///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1836///Cancer.Type: Short///AgeDx: 57///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1900///Cancer.Type: Long///AgeDx: 62///STAGE: IIIA///GRADE: 3///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1901///Cancer.Type: Long///AgeDx: 50///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1902///Cancer.Type: Long///AgeDx: 67///STAGE: IIIC///GRADE: 1///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1903///Cancer.Type: Early stage///AgeDx: 73///STAGE: IIC///GRADE: 3///Debulking: ///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1904///Cancer.Type: Long///AgeDx: 70///STAGE: IIIC///GRADE: 3///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1905///Cancer.Type: Short///AgeDx: 70///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1906///Cancer.Type: Short///AgeDx: 75///STAGE: IIIB///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1907///Cancer.Type: Long///AgeDx: 73///STAGE: IIIC///GRADE: 4///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1908///Cancer.Type: Short///AgeDx: 59///STAGE: IIIC///GRADE: 3///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1909///Cancer.Type: Short///AgeDx: 65///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1989///Cancer.Type: Long///AgeDx: 67///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2003///Cancer.Type: Short///AgeDx: 49///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2004///Cancer.Type: Short///AgeDx: 55///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2005///Cancer.Type: Short///AgeDx: 47///STAGE: IIIC///GRADE: ?///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2019///Cancer.Type: Long///AgeDx: 48///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2020///Cancer.Type: Long///AgeDx: 58///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2021///Cancer.Type: Long///AgeDx: 62///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2026///Cancer.Type: Short///AgeDx: 46///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2027///Cancer.Type: Short///AgeDx: 65///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2028///Cancer.Type: Short///AgeDx: 71///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2029///Cancer.Type: Short///AgeDx: 68///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2030///Cancer.Type: Short///AgeDx: 54///STAGE: IV///GRADE: 3///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2031///Cancer.Type: Long///AgeDx: 63///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2032///Cancer.Type: Long///AgeDx: 58///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2033///Cancer.Type: Long///AgeDx: 57///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2390///Cancer.Type: Early stage///AgeDx: 66///STAGE: IA///GRADE: 2///Debulking: ///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2391///Cancer.Type: Early stage///AgeDx: 77///STAGE: IA///GRADE: 3///Debulking: ///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2392///Cancer.Type: Early stage///AgeDx: 46///STAGE: IIC///GRADE: 3///Debulking: ///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2393///Cancer.Type: Early stage///AgeDx: 49///STAGE: IIC///GRADE: 2///Debulking: ///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2394///Cancer.Type: Long///AgeDx: 62///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2395///Cancer.Type: Long///AgeDx: 40///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2396///Cancer.Type: Short///AgeDx: 73///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2397///Cancer.Type: Short///AgeDx: 57///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2398///Cancer.Type: Short///AgeDx: 37///STAGE: IV///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2399///Cancer.Type: Short///AgeDx: 62///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2400///Cancer.Type: Short///AgeDx: 62///STAGE: IIIC///GRADE: 3///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2401///Cancer.Type: Short///AgeDx: 57///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2402///Cancer.Type: Short///AgeDx: 57///STAGE: IV///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2536///Cancer.Type: Early stage///AgeDx: 42///STAGE: IA///GRADE: 1///Debulking: ///X: NA
1
Value
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Description Format Details Value
Description
A better understanding of the underlying biology of invasive serous ovarian cancer is critical for the development of early detection strategies and new therapeutics. The objective of this study was to define gene expression patterns associated with favorable survival.RNA from 65 serous ovarian cancers was analyzed using Affymetrix U133A microarrays. This included 54 stage III/IV cases (30 short-term survivors who lived <3 years and 24 long-term survivors who lived >7 years) and 11 stage I/II cases. Genes were screened on the basis of their level of and variability in expression, leaving 7,821 for use in developing a predictive model for survival. A composite predictive model was developed that combines Bayesian classification tree and multivariate discriminant models. Leave-one-out cross-validation was used to select and evaluate models.Patterns of genes were identified that distinguish short-term and long-term ovarian cancer survivors. The expression model developed for advanced stage disease classified all 11 early-stage ovarian cancers as long-term survivors. The MAL gene, which has been shown to confer resistance to cancer therapy, was most highly overexpressed in short-term survivors (3-fold compared with long-term survivors, and 29-fold compared with early-stage cases). These results suggest that gene expression patterns underlie differences in outcome, and an examination of the genes that provide this discrimination reveals that many are implicated in processes that define the malignant phenotype.Differences in survival of advanced ovarian cancers are reflected by distinct patterns of gene expression. This biological distinction is further emphasized by the finding that early-stage cancers share expression patterns with the advanced stage long-term survivors, suggesting a shared favorable biology.
Format
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 | experimentData(eset):
Experiment data
Experimenter name: Berchuck A, Iversen ES, Lancaster JM, Pittman J, Luo J, Lee P, Murphy S, Dressman HK, Febbo PG, West M, Nevins JR, Marks JR.Patterns of gene expression that characterize long-term survival in advanced stage serous ovarian cancers. Clin Cancer Res. 2005 May 15; 11(10):3686-96.
Laboratory: Berchuck, Marks 2005
Contact information:
Title: Patterns of gene expression that characterize long-term survival in advanced stage serous ovarian cancers.
URL:
PMIDs: 15897565
Abstract: A 258 word abstract is available. Use 'abstract' method.
Information is available on: preprocessing
notes:
platform_title:
[HG-U133A] Affymetrix Human Genome U133A Array
platform_shorttitle:
Affymetrix HG-U133A
platform_summary:
hgu133a
platform_manufacturer:
Affymetrix
platform_distribution:
commercial
platform_accession:
GPL96
warnings:
These samples are a subset of PMID17290060.
version:
2015-09-22 20:17:53
featureData(eset):
An object of class 'AnnotatedDataFrame'
featureNames: 1007_s_at 1053_at ... AFFX-HUMISGF3A/M97935_MB_at
(20967 total)
varLabels: probeset gene EntrezGene.ID best_probe
varMetadata: labelDescription
|
Details
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 | assayData: 20967 features, 63 samples
Platform type:
---------------------------
Available sample meta-data:
---------------------------
alt_sample_name:
Min. 1st Qu. Median Mean 3rd Qu. Max.
1761 1828 1907 2001 2032 2536
sample_type:
tumor
63
histological_type:
ser
63
primarysite:
ov
63
summarygrade:
high low NA's
25 37 1
summarystage:
early late
11 52
tumorstage:
1 2 3 4
7 4 48 4
grade:
1 2 3 4 NA's
2 35 24 1 1
age_at_initial_pathologic_diagnosis:
Min. 1st Qu. Median Mean 3rd Qu. Max.
33.00 52.50 59.00 59.21 67.00 79.00
os_binary:
long short NA's
24 28 11
debulking:
optimal suboptimal NA's
24 28 11
batch:
2002-09-20 2002-10-23 2002-11-12 2002-12-16 2002-12-21 2003-01-03 2003-05-30
15 9 10 1 3 11 13
2003-07-02
1
uncurated_author_metadata:
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1761///Cancer.Type: Early stage///AgeDx: 72///STAGE: IC///GRADE: 2///Debulking: ///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1762///Cancer.Type: Early stage///AgeDx: 52///STAGE: IA///GRADE: 3///Debulking: ///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1763///Cancer.Type: Early stage///AgeDx: 58///STAGE: IIC///GRADE: 2///Debulking: ///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1764///Cancer.Type: Early stage///AgeDx: 48///STAGE: IC///GRADE: 3///Debulking: ///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1765///Cancer.Type: Early stage///AgeDx: 45///STAGE: IA///GRADE: 2///Debulking: ///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1772///Cancer.Type: Long///AgeDx: 33///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1773///Cancer.Type: Long///AgeDx: 68///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1774///Cancer.Type: Long///AgeDx: 56///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1775///Cancer.Type: Long///AgeDx: 60///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1776///Cancer.Type: Long///AgeDx: 40///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1777///Cancer.Type: Long///AgeDx: 78///STAGE: IIIB///GRADE: 3///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1778///Cancer.Type: Long///AgeDx: 66///STAGE: IIIB///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1779///Cancer.Type: Long///AgeDx: 53///STAGE: IIIC///GRADE: 3///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1780///Cancer.Type: Long///AgeDx: 63///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
1
Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1781///Cancer.Type: Long///AgeDx: 73///STAGE: IIIC///GRADE: 3///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1828///Cancer.Type: Short///AgeDx: 59///STAGE: IV///GRADE: 3///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1829///Cancer.Type: Short///AgeDx: 65///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1830///Cancer.Type: Short///AgeDx: 79///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1831///Cancer.Type: Short///AgeDx: 70///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1832///Cancer.Type: Short///AgeDx: 59///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1833///Cancer.Type: Short///AgeDx: 55///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1834///Cancer.Type: Short///AgeDx: 48///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1835///Cancer.Type: Short///AgeDx: 54///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1836///Cancer.Type: Short///AgeDx: 57///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1900///Cancer.Type: Long///AgeDx: 62///STAGE: IIIA///GRADE: 3///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1901///Cancer.Type: Long///AgeDx: 50///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1902///Cancer.Type: Long///AgeDx: 67///STAGE: IIIC///GRADE: 1///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1903///Cancer.Type: Early stage///AgeDx: 73///STAGE: IIC///GRADE: 3///Debulking: ///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1904///Cancer.Type: Long///AgeDx: 70///STAGE: IIIC///GRADE: 3///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1905///Cancer.Type: Short///AgeDx: 70///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1906///Cancer.Type: Short///AgeDx: 75///STAGE: IIIB///GRADE: 2///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1907///Cancer.Type: Long///AgeDx: 73///STAGE: IIIC///GRADE: 4///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1908///Cancer.Type: Short///AgeDx: 59///STAGE: IIIC///GRADE: 3///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1909///Cancer.Type: Short///AgeDx: 65///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 1989///Cancer.Type: Long///AgeDx: 67///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2003///Cancer.Type: Short///AgeDx: 49///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2004///Cancer.Type: Short///AgeDx: 55///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2005///Cancer.Type: Short///AgeDx: 47///STAGE: IIIC///GRADE: ?///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2019///Cancer.Type: Long///AgeDx: 48///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2020///Cancer.Type: Long///AgeDx: 58///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2021///Cancer.Type: Long///AgeDx: 62///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2026///Cancer.Type: Short///AgeDx: 46///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2027///Cancer.Type: Short///AgeDx: 65///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2028///Cancer.Type: Short///AgeDx: 71///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2029///Cancer.Type: Short///AgeDx: 68///STAGE: IIIC///GRADE: 3///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2030///Cancer.Type: Short///AgeDx: 54///STAGE: IV///GRADE: 3///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2031///Cancer.Type: Long///AgeDx: 63///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2032///Cancer.Type: Long///AgeDx: 58///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2033///Cancer.Type: Long///AgeDx: 57///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2390///Cancer.Type: Early stage///AgeDx: 66///STAGE: IA///GRADE: 2///Debulking: ///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2391///Cancer.Type: Early stage///AgeDx: 77///STAGE: IA///GRADE: 3///Debulking: ///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2392///Cancer.Type: Early stage///AgeDx: 46///STAGE: IIC///GRADE: 3///Debulking: ///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2393///Cancer.Type: Early stage///AgeDx: 49///STAGE: IIC///GRADE: 2///Debulking: ///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2394///Cancer.Type: Long///AgeDx: 62///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2395///Cancer.Type: Long///AgeDx: 40///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2396///Cancer.Type: Short///AgeDx: 73///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2397///Cancer.Type: Short///AgeDx: 57///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2398///Cancer.Type: Short///AgeDx: 37///STAGE: IV///GRADE: 2///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2399///Cancer.Type: Short///AgeDx: 62///STAGE: IIIC///GRADE: 2///Debulking: S///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2400///Cancer.Type: Short///AgeDx: 62///STAGE: IIIC///GRADE: 3///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2401///Cancer.Type: Short///AgeDx: 57///STAGE: IIIC///GRADE: 2///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2402///Cancer.Type: Short///AgeDx: 57///STAGE: IV///GRADE: 2///Debulking: O///X: NA
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Genome.ID..File.name....0074_GenomeID_h133a_2802.cel: 2536///Cancer.Type: Early stage///AgeDx: 42///STAGE: IA///GRADE: 1///Debulking: ///X: NA
1
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