Tools for manipulation of RiboSeq, RNASeq and CageSeq data. ORFik is extremely fast through use of C, data.table and GenomicRanges. Package allows to reassign starts of the transcripts with the use of CageSeq data, automatic shifting of RiboSeq reads, finding of Open Reading Frames for whole genomes and much more.
|Author||Haakon Tjeldnes [aut, dtc], Kornel Labun [aut, cre, cph], Katarzyna Chyzynska [ctb, dtc], Evind Valen [ths, fnd]|
|Bioconductor views||Alignment Coverage DataImport FunctionalGenomics ImmunoOncology RNASeq RiboSeq Sequencing Software|
|Maintainer||Kornel Labun <[email protected]>|
|License||MIT + file LICENSE|
|Package repository||View on Bioconductor|
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