A much faster way to store, load and use bam files.
.bedoc is .bed ORFik, an optimized bed format for coverage reads with cigar and replicate number.
.bedoc is a text based format with columns (5 maximum):
2. cigar: (cigar # M's, match/mismatch total)
3. start (left most position)
4. strand (+, -, *)
5. score: duplicates of that read
a GAlignments object
a character, location on disc (full path)
Positions are 1-based, not 0-based as .bed. Import with import.bedoc
NULL, object saved to disc
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