stopDefinition: Returns stop codon definitions
In ORFik: Open Reading Frames in Genomics
Description
Usage
Arguments
Value
See Also
Examples
Description
According to:
<http://www.ncbi.nlm.nih.gov/Taxonomy/taxonomyhome.html/
index.cgi?chapter=tgencodes#SG1>
ncbi genetic code number for translation. This version is a cleaned up
version, unknown indices removed.
Usage
1
stopDefinition(transl_table)
Arguments
transl_table
numeric. NCBI genetic code number for translation.
Value
A string of STOP sites separatd with "|".
See Also
Other findORFs:
findMapORFs(),
findORFsFasta(),
findORFs(),
findUORFs(),
startDefinition()
Examples
1
2
ORFik documentation built on March 27, 2021, 6 p.m.
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Description Usage Arguments Value See Also Examples
Description
According to: <http://www.ncbi.nlm.nih.gov/Taxonomy/taxonomyhome.html/ index.cgi?chapter=tgencodes#SG1> ncbi genetic code number for translation. This version is a cleaned up version, unknown indices removed.
Usage
1 | stopDefinition(transl_table)
|
Arguments
transl_table |
numeric. NCBI genetic code number for translation. |
Value
A string of STOP sites separatd with "|".
See Also
Other findORFs:
findMapORFs(),
findORFsFasta(),
findORFs(),
findUORFs(),
startDefinition()
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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