viewLegend: View the legends for the graph built for PAN

In PANR: Posterior association networks and functional modules inferred from rich phenotypes of gene perturbations

Description

This function helps the user to view legends for the built PAN graph.

Usage

viewLegend(object, what="nodeColor", ...)

Arguments

object	an object of S4 class PAN.
what	a character value specifying which legend to view: ‘nodeColor’, ‘nodeSize’ or ‘edgeWidth’.
...	not in use, but only for further extension.

Author(s)

Xin Wang [e-mail]

Examples

## Not run: 
data(bm, package="PANR")
pan<-new("PAN", bm1=bm1)
pan<-infer(pan, para=list(type="SNR", log=TRUE, sign=TRUE, cutoff=log(5)),
filter=FALSE, verbose=TRUE)
data(Bakal2007Cluster, package="PANR")
pan<-buildPAN(pan, engine="igraph", para=list(nodeColor=nodeColor, 
hideNeg=TRUE), verbose=TRUE)
viewLegend(pan, "edgeWidth")

## End(Not run)

PANR documentation built on Nov. 8, 2020, 8:15 p.m.