getOmaMembers: Get OMA members
In PhyloProfile: PhyloProfile
Description
Usage
Arguments
Value
Author(s)
Examples
View source: R/getOmaBrowser.R
Description
Get OMA ortholog group, OMA HOG or OMA pair's members for a
seed protein from OMA Browser.
Usage
1
getOmaMembers(id = NULL, orthoType = "OG")
Arguments
id
ID of the seed protein (OMA or UniProt ID)
orthoType
type of OMA orthologs: either "HOG", "OG"
(orthologous group) or "PAIR" (orthologous pair - CURRENTLY NOT WORKING).
Default = "OG".
Value
List of OMA orthologs for an input seed protein.
Author(s)
Carla Mölbert carla.moelbert@gmx.de
Examples
1
2
print("Uncomment the following line to run the function")
# getOmaMembers("HUMAN29397", "OG")
PhyloProfile documentation built on March 27, 2021, 6:01 p.m.
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Description Usage Arguments Value Author(s) Examples
View source: R/getOmaBrowser.R
Description
Get OMA ortholog group, OMA HOG or OMA pair's members for a seed protein from OMA Browser.
Usage
1 | getOmaMembers(id = NULL, orthoType = "OG")
|
Arguments
id |
ID of the seed protein (OMA or UniProt ID) |
orthoType |
type of OMA orthologs: either "HOG", "OG" (orthologous group) or "PAIR" (orthologous pair - CURRENTLY NOT WORKING). Default = "OG". |
Value
List of OMA orthologs for an input seed protein.
Author(s)
Carla Mölbert carla.moelbert@gmx.de
Examples
1 2 | print("Uncomment the following line to run the function")
# getOmaMembers("HUMAN29397", "OG")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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