Amino Acid Composition Descriptor

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Description

Amino Acid Composition Descriptor

Usage

1
extractProtAAC(x)

Arguments

x

A character vector, as the input protein sequence.

Details

This function calculates the Amino Acid Composition descriptor (Dim: 20).

Value

A length 20 named vector

Author(s)

Nan Xiao <http://nanx.me>

References

M. Bhasin, G. P. S. Raghava. Classification of Nuclear Receptors Based on Amino Acid Composition and Dipeptide Composition. Journal of Biological Chemistry, 2004, 279, 23262.

See Also

See extractProtDC and extractProtTC for Dipeptide Composition and Tripeptide Composition descriptors.

Examples

1
2
x = readFASTA(system.file('protseq/P00750.fasta', package = 'Rcpi'))[[1]]
extractProtAAC(x)

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