extractProtTC: Tripeptide Composition Descriptor

Description Usage Arguments Details Value Author(s) References See Also Examples

View source: R/403-extractProtTC.R

Description

Tripeptide Composition Descriptor

Usage

1

Arguments

x

A character vector, as the input protein sequence.

Details

This function calculates the Tripeptide Composition descriptor (Dim: 8000).

Value

A length 8000 named vector

Author(s)

Nan Xiao <https://nanx.me>

References

M. Bhasin, G. P. S. Raghava. Classification of Nuclear Receptors Based on Amino Acid Composition and Dipeptide Composition. Journal of Biological Chemistry, 2004, 279, 23262.

See Also

See extractProtAAC and extractProtDC for Amino Acid Composition and Dipeptide Composition descriptors.

Examples

1
2
x = readFASTA(system.file('protseq/P00750.fasta', package = 'Rcpi'))[[1]]
extractProtTC(x)

Rcpi documentation built on Nov. 20, 2017, 2:01 a.m.