extractProtDC: Dipeptide Composition Descriptor

Description Usage Arguments Details Value Author(s) References See Also Examples

View source: R/402-extractProtDC.R

Description

Dipeptide Composition Descriptor

Usage

1

Arguments

x

A character vector, as the input protein sequence.

Details

This function calculates the Dipeptide Composition descriptor (Dim: 400).

Value

A length 400 named vector

Author(s)

Nan Xiao <https://nanx.me>

References

M. Bhasin, G. P. S. Raghava. Classification of Nuclear Receptors Based on Amino Acid Composition and Dipeptide Composition. Journal of Biological Chemistry, 2004, 279, 23262.

See Also

See extractProtAAC and extractProtTC for Amino Acid Composition and Tripeptide Composition descriptors.

Examples

1
2
x = readFASTA(system.file('protseq/P00750.fasta', package = 'Rcpi'))[[1]]
extractProtDC(x)

Rcpi documentation built on Nov. 20, 2017, 2:01 a.m.