Exports (selected) methylation tables of the given dataset to comma-separated value files.
Methylation dataset as an object of type inheriting
The names of the generated output files are formed by the prefix
"betas_", followed by a number between
length(region.types). The extension is
.csv.gz, depending on the value of the
"gz.large.files". Any such files that already exist in the output directory, are
There are several reasons why a certain output file cannot be (fully) generated. Examples for failures are listed below:
The corresponding region type is invalid.
The corresponding region type is not supported by the dataset. If the type is loaded in RnBeads,
summarize.regions method prior to calling this function,
in order to include the support of this region type in the dataset.
Due to security restrictions, the creation of files in the output directory is not allowed.
A file or directory with the same name exists and cannot be overwritten.
The disk is full or the user quota is exceeded.
character vector containing the names of the files to which data were exported; prepended by
output.location. In case a certain region type could not be exported (see the Details section),
the corresponding element of this vector is
1 2 3