summarized.regions-methods: summarized.regions-methods
In RnBeads: RnBeads
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
Gets the genomic annotations for which methylation data is present in the RnBSet object.
Usage
1
2
## S4 method for signature 'RnBSet'
summarized.regions(object)
Arguments
object
Methylation dataset of interest.
Value
character vector listing all genomic annotations summarized in the given dataset. If the dataset
contains methylation in sites only, an empty vector is returned.
Author(s)
Yassen Assenov
See Also
summarize.regions for calculating region-wise methylation in a dataset;
rnb.set.annotation for adding or replacing a region annotation table
Examples
1
2
3
library(RnBeads.hg19)
data(small.example.object)
summarized.regions(rnb.set.example)
RnBeads documentation built on March 3, 2021, 2 a.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
Gets the genomic annotations for which methylation data is present in the RnBSet object.
Usage
1 2 | ## S4 method for signature 'RnBSet'
summarized.regions(object)
|
Arguments
object |
Methylation dataset of interest. |
Value
character vector listing all genomic annotations summarized in the given dataset. If the dataset
contains methylation in sites only, an empty vector is returned.
Author(s)
Yassen Assenov
See Also
summarize.regions for calculating region-wise methylation in a dataset;
rnb.set.annotation for adding or replacing a region annotation table
Examples
1 2 3 | library(RnBeads.hg19)
data(small.example.object)
summarized.regions(rnb.set.example)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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