rnb.region.types: rnb.region.types
In RnBeads: RnBeads
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
Gets the supported region annotations for a given genome assembly.
Usage
1
rnb.region.types(assembly = "hg19")
Arguments
assembly
Genome assembly of interest. See rnb.get.assemblies for the list of supported genomes.
Value
Region types supported by RnBeads in the form of a character vector. The built-in ones are
"cpgislands", "genes", "promoters" and "tiling". The names of all custom region
definitions are also included in the returned vector.
Author(s)
Yassen Assenov
See Also
rnb.get.annotation, rnb.set.annotation
Examples
1
"promoters" %in% rnb.region.types() # TRUE
RnBeads documentation built on March 3, 2021, 2 a.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
Gets the supported region annotations for a given genome assembly.
Usage
1 | rnb.region.types(assembly = "hg19")
|
Arguments
assembly |
Genome assembly of interest. See |
Value
Region types supported by RnBeads in the form of a character vector. The built-in ones are
"cpgislands", "genes", "promoters" and "tiling". The names of all custom region
definitions are also included in the returned vector.
Author(s)
Yassen Assenov
See Also
rnb.get.annotation, rnb.set.annotation
Examples
1 | "promoters" %in% rnb.region.types() # TRUE
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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