createGOMatrix: A function to create the bipartite graph (BG) incidence...
In ScISI: In Silico Interactome
Description
Usage
Arguments
Value
Author(s)
Examples
View source: R/createGOMatrix.R
Description
This function takes the output from the getGOInfo function and
creates the bipartite graph (BG) incidence matrix from the output.
Usage
1
createGOMatrix(cMembers)
Arguments
cMembers
A named list consisting of vectors. Each list item is
named by a protein complex GO ID and points to a character vector
where each character vector consists of the proteins composing of
that protein complex.
Value
A bipartite graph matrix of the corresponding GO protein complexes
where the rows are indexed by the protein names and the colunms by
GO ID's.
Author(s)
Tony Chiang
Examples
1
2
#cMembers = getGOInfo(wantAllComplexes = FALSE)
#createGOMatrix(cMembers)
ScISI documentation built on Nov. 8, 2020, 5:48 p.m.
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Description Usage Arguments Value Author(s) Examples
View source: R/createGOMatrix.R
Description
This function takes the output from the getGOInfo function and
creates the bipartite graph (BG) incidence matrix from the output.
Usage
1 | createGOMatrix(cMembers)
|
Arguments
cMembers |
A named list consisting of vectors. Each list item is named by a protein complex GO ID and points to a character vector where each character vector consists of the proteins composing of that protein complex. |
Value
A bipartite graph matrix of the corresponding GO protein complexes where the rows are indexed by the protein names and the colunms by GO ID's.
Author(s)
Tony Chiang
Examples
1 2 | #cMembers = getGOInfo(wantAllComplexes = FALSE)
#createGOMatrix(cMembers)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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