createMipsDataFrame: A function that creates a data frame from the MIPS Data
In ScISI: In Silico Interactome

Description Usage Arguments Value Author(s) References

This function takes two parameters: (1) a named vector that has a description of the MIPS protein complexes (this vector is one of the two outputs from getMipsInfo referenced by DESC); (2) the matrix representation of the bipartite graph. The output of the function is a dataframe with three columns: the names of the complexes in the matrix; the ID of the corresponding complex; the description of the corresponding complex.

1	createMipsDataFrame(desc, mips)

`desc`	A named character vector (where the name is the MIPS ID for each protein complex obtained by `getMipsInfo`) whose entries describe the corrsponding protein complex.
`mips`	The matrix representation of the protein complex membership graph for the MIPS protein complexes

The return value is a data frame with three coluumns: the names column records the names of the protein complexes as indexed in the incidence matrix; the ID column records the MIPS ID that corresponds to each protein complex; the Desc column describes each of the protein complexes.

Tony Chiang

mips.gsf.de

ScISI documentation built on Nov. 8, 2020, 5:48 p.m.