runAlignment: A function to establish preliminaries for the compBijection...
In ScISI: In Silico Interactome
Description
Usage
Arguments
Value
Author(s)
Examples
Description
This function creates the record keeping bijMat and calls the
compBijection function.
Usage
1
runAlignment(TSNMat, estMat, c2kMat)
Arguments
TSNMat
The first bipartite graph matrix
estMat
The second bipartite graph matrix
c2kMat
The matrix of similarity index between TSNMat and estMat
Value
The matrix bijMat with an alignment calculated by the function
compBijection
Author(s)
Tony Chiang
Examples
1
2
3
4
5
6
#go = getGOInfo()
#mips = getMipsInfo()
#goM = createGOMatrix(go)
#mipsM = createMipsMatrix(mips)
#cc = runCompareComplex(mipsM, goM, byWhich = "ROW")
#align = runAlignment(mipsM, goM, cc$simInd)
ScISI documentation built on Nov. 8, 2020, 5:48 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
This function creates the record keeping bijMat and calls the
compBijection function.
Usage
1 | runAlignment(TSNMat, estMat, c2kMat)
|
Arguments
TSNMat |
The first bipartite graph matrix |
estMat |
The second bipartite graph matrix |
c2kMat |
The matrix of similarity index between TSNMat and estMat |
Value
The matrix bijMat with an alignment calculated by the function
compBijection
Author(s)
Tony Chiang
Examples
1 2 3 4 5 6 | #go = getGOInfo()
#mips = getMipsInfo()
#goM = createGOMatrix(go)
#mipsM = createMipsMatrix(mips)
#cc = runCompareComplex(mipsM, goM, byWhich = "ROW")
#align = runAlignment(mipsM, goM, cc$simInd)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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