Files in ScISI
In Silico Interactome

NAMESPACE
DESCRIPTION
R/createYeastDataObj.R R/edgeProp.R R/checkSGN.R R/JaccardCoef.R R/findSubComp.R R/runCompareComplex.R R/rmByEvi.R R/runAlignment.R R/sumStats.R R/compareComplex.R R/maximizeSimilarity.R R/getMipsInfo.R R/createMipsDataFrame.R R/createGOMatrix.R R/getLocOrfs.R R/graphSumStats.R R/calcGraphStats.R R/getGOInfo.R R/xtraGONodes.R R/recCompSize.R R/unWantedComp.R R/getAPMSData.R R/mergeBGMat.R R/initClasses.R R/createGODataFrame.R R/compBijection.R R/ScISI2html.R R/createMipsMatrix.R R/checkComplex.R R/meanDeg.R man/gavin2mergeMG.Rd man/runCompareComplex.Rd man/egEBI16112.Rd man/redundantM.Rd man/edgeProp.Rd man/mappingsG.Rd man/yeastData-class.Rd man/createMipsMatrix.Rd man/nonGenes.Rd man/createGOMatrix.Rd man/recCompSize.Rd man/findSubComp.Rd man/krogan2mergeMGGH.Rd man/ho2mergeMGG.Rd man/unwanted.Rd man/subCompM.Rd man/compareComplex.Rd man/arp23G.Rd man/xtraGO.Rd man/getGOInfo.Rd man/locScISI.Rd man/arp23Orf.Rd man/rmByEvi.Rd man/createGODataFrame.Rd man/ScISI2html.Rd man/getLocOrfs.Rd man/unWantedComp.Rd man/runAlignment.Rd man/nAt.Rd man/createMipsDataFrame.Rd man/graphSumStats.Rd man/checkSGN.Rd man/compBijection.Rd man/arp23Y2HG.Rd man/sumStats.Rd man/mapping2SysG.Rd man/mips2go.Rd man/cfia.Rd man/xtraGONodes.Rd man/Desc-methods.Rd man/createYeastDataObj.Rd man/ScISI.Rd man/getMipsInfo.Rd man/mergeBGMat.Rd man/getURL-methods.Rd man/arp23.Rd man/checkComplex.Rd man/cfiaOrf.Rd man/eAt2.Rd man/dataS.Rd man/nucComp.Rd man/nAtMap.Rd man/JaccardCoef.Rd man/getAPMSData.Rd man/expStats.Rd man/maximizeSimilarity.Rd man/ID-methods.Rd man/meanDeg.Rd man/calcGraphStats.Rd man/eAt.Rd
inst/extdata/evidencecat.scheme
inst/extdata/complexcat_data_18052006.gz
inst/extdata/PPI_141105.tab.gz
inst/extdata/Arp2_3_complex.png
inst/extdata/protein_network_large.jpg
inst/extdata/complexcat.scheme.edit
inst/extdata/Arp2_3_complex.jpg
inst/extdata/complexcat_data_20062005.gz
inst/extdata/complexcat.scheme
inst/extdata/complexcat_data_14112005.gz
inst/extdata/graphs/arp23BP.rda
inst/extdata/graphs/arp23BPG.rda
inst/extdata/graphs/arp23G.rda
inst/extdata/graphs/ppi2G.rda
inst/extdata/graphs/arp23CMG.rda
inst/extdata/graphs/cfiaAM.rda
inst/extdata/graphs/ppi2.rda
inst/extdata/graphs/cfiaG.rda
inst/extdata/graphs/cfiaCMG.rda
inst/extdata/graphs/ppi1G.rda
inst/extdata/graphs/cfiaCMM.rda
inst/extdata/graphs/ppi1.rda
inst/extdata/graphs/arp23CMM.rda
inst/extdata/graphs/Readme
inst/extdata/graphs/arp23AM.rda
inst/extdata/localization/allOrfData.txt
inst/extdata/pathway/sgdPathM.rda
inst/extdata/pathway/keggM.rda
inst/extdata/pathway/biochemical_pathways.tab
inst/doc/vignette.Rnw
inst/doc/vignette.pdf inst/doc/vignette.R
inst/TODO/Validate
inst/TODO/CrystalStructures
inst/Scripts/Comments
inst/Scripts/creatingScISI.Rnw
inst/Scripts/ckCrystStruct.R inst/Scripts/estHo02.R
inst/Scripts/getLocOrfs.Rnw
inst/Scripts/graphStatistics.Rnw
inst/Scripts/createScISI.R inst/Scripts/sim.R inst/Scripts/estGavin06.R inst/Scripts/createScISIC.R inst/Scripts/estGavin02.R
inst/Scripts/C1G.rda
inst/Scripts/estKrogan04.R
inst/Scripts/notesOtherComps
inst/Scripts/getMipsY2HInfo.R inst/Scripts/createMipsY2HMatrix.R inst/Scripts/test1.R inst/Scripts/notesMips.R inst/Scripts/estimateComp.R inst/Scripts/estKrogan06.R
inst/Scripts/Comments2
vignettes/vignette.Rnw
vignettes/bioc.bib
build/vignette.rds
data/locScISI.rda
data/ScISIverified.R
data/mapping2SysG.rda
data/mips2go.rda
data/nucComp.rda
data/xtraGO.rda
data/krogan2mergeMGGH.rda
data/eAt.rda
data/ScISIverified.rda
data/cfiaOrf.rda
data/ScISI.rda
data/nonGenes.rda
data/redundantM.rda
data/egEBI16112.rda
data/eAt2.rda
data/dataS.rda
data/nAt.rda
data/gavin2mergeMG.rda
data/arp23G.rda
data/mappingsG.rda
data/ScISIC.rda
data/arp23Y2HG.rda
data/cfia.rda
data/ho2mergeMGG.rda
data/arp23Orf.rda
data/subCompM.rda
data/unwanted.rda
data/expStats.rda
data/arp23.rda
data/nAtMap.rda
ScISI documentation built on Nov. 17, 2017, 2:05 p.m.