fill: Fill large spaces in one profile with NA
In Starr: Simple tiling array analysis of Affymetrix ChIP-chip data
Description
Usage
Arguments
Value
Author(s)
View source: R/getProfilesMiddle.R
Description
This function fills spaces in a profiles, that exceed a given distance.
It is called by fillNA.
Usage
1
fill(pos, val, distance, spacing, strand)
Arguments
pos
a vector with genomic position of the signals
val
a vector, with ChIP signals
distance
spaces, exceeding this distance are filled with NA
spacing
probe spacing on the chip
strand
watson (+1), or crick (-1)
Value
a vector of signals, filled with NA
Author(s)
Benedikt Zacher zacher@lmb.uni-muenchen.de
Starr documentation built on April 28, 2020, 7:52 p.m.
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Description Usage Arguments Value Author(s)
View source: R/getProfilesMiddle.R
Description
This function fills spaces in a profiles, that exceed a given distance. It is called by fillNA.
Usage
1 | fill(pos, val, distance, spacing, strand)
|
Arguments
pos |
a vector with genomic position of the signals |
val |
a vector, with ChIP signals |
distance |
spaces, exceeding this distance are filled with NA |
spacing |
probe spacing on the chip |
strand |
watson (+1), or crick (-1) |
Value
a vector of signals, filled with NA
Author(s)
Benedikt Zacher zacher@lmb.uni-muenchen.de
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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