API for Starr
Simple tiling array analysis of Affymetrix ChIP-chip data

Global functions
RGlist2ExpresionSet	Man page Source code
`declare.bound`	Source code
`ma.stat`	Source code
`rm.small.peak`	Source code
backgd.sd	Man page Source code
bpmapToProbeAnno	Man page Source code
cmarrt.ma	Man page Source code
cmarrt.peak	Man page
correlate	Man page Source code
correlationPlot	Man page Source code
declare.bound	Man page
densityscatter	Man page Source code
expressionByFeature	Man page Source code
fill	Man page Source code
fillNA	Man page Source code
filterGenes	Man page Source code
getFeature	Man page Source code
getIntensities	Man page Source code
getMeans	Man page Source code
getProfiles	Man page Source code
getProfilesByBase	Man page
getRatio	Man page Source code
heatmapplot	Man page Source code
intersection	Man page Source code
kde2dplot	Man page Source code
list2matrix	Man page Source code
ma.stat	Man page
makeProbeAnno	Man page Source code
makeSplines	Man page Source code
mapFeatures	Man page Source code
match_ac	Man page Source code
normalize.Probes	Man page
plotBoxes	Man page Source code
plotDensity	Man page Source code
plotGCbias	Man page
plotImage	Man page Source code
plotMA	Man page Source code
plotPosBias	Man page
plotProfiles	Man page Source code
plotRatioScatter	Man page Source code
plotScatter	Man page Source code
plotcmarrt	Man page Source code
profileplot	Man page Source code
rankPercentile.normalize	Man page Source code
read.gffAnno	Man page Source code
readCelFile	Man page
remap	Man page Source code
rm.small.peak	Man page
sameLength	Man page Source code
singleclusterplot	Man page Source code
sortbygenomic	Man page Source code
substract	Man page Source code
whichIn	Man page Source code
windowxy	Man page Source code
writeGFF	Man page Source code
writePosFile	Man page Source code
writeWIG	Man page