API for Starr
Simple tiling array analysis of Affymetrix ChIP-chip data

Global functions
RGlist2ExpresionSet Man page Source code
backgd.sd Man page Source code
bpmapToProbeAnno Man page Source code
cmarrt.ma Man page Source code
cmarrt.peak Man page Source code
correlate Man page Source code
correlationPlot Man page Source code
declare.bound Man page
densityscatter Man page Source code
expressionByFeature Man page Source code
fill Man page Source code
fillNA Man page Source code
filterGenes Man page Source code
getFeature Man page Source code
getIntensities Man page Source code
getMeans Man page Source code
getProfiles Man page Source code
getProfilesByBase Man page Source code
getRatio Man page Source code
heatmapplot Man page Source code
intersection Man page Source code
kde2dplot Man page Source code
list2matrix Man page Source code
ma.stat Man page
makeProbeAnno Man page Source code
makeSplines Man page Source code
mapFeatures Man page Source code
match_ac Man page Source code
normalize.Probes Man page Source code
plotBoxes Man page Source code
plotDensity Man page Source code
plotGCbias Man page Source code
plotImage Man page Source code
plotMA Man page Source code
plotPosBias Man page Source code
plotProfiles Man page Source code
plotRatioScatter Man page Source code
plotScatter Man page Source code
plotcmarrt Man page Source code
profileplot Man page Source code
rankPercentile.normalize Man page Source code
read.gffAnno Man page Source code
readCelFile Man page Source code
remap Man page Source code
rm.small.peak Man page
sameLength Man page Source code
singleclusterplot Man page Source code
sortbygenomic Man page Source code
substract Man page Source code
whichIn Man page Source code
windowxy Man page Source code
writeGFF Man page Source code
writePosFile Man page Source code
writeWIG Man page Source code
Starr documentation built on Nov. 17, 2017, 10:09 a.m.