read.gffAnno: Reading gff annotation
In Starr: Simple tiling array analysis of Affymetrix ChIP-chip data
Description
Usage
Arguments
Author(s)
Examples
View source: R/parseGffAnnotation.R
Description
This functions reads the annotation from a gff file.
Usage
1
read.gffAnno(gffFile, feature=NULL)
Arguments
gffFile
path to file
feature
feature to select ("character"). If feature="gene", then only rows, representing this feature are read.
Author(s)
Benedikt Zacher zacher@lmb.uni-muenchen.de
Examples
1
2
3
##
# dataPath <- system.file("extdata", package="Starr")
# transcriptAnno <- read.gffAnno(file.path(dataPath, "transcriptAnno.gff"), feature="transcript")
Starr documentation built on April 28, 2020, 7:52 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Author(s) Examples
View source: R/parseGffAnnotation.R
Description
This functions reads the annotation from a gff file.
Usage
1 | read.gffAnno(gffFile, feature=NULL)
|
Arguments
gffFile |
path to file |
feature |
feature to select ("character"). If feature="gene", then only rows, representing this feature are read. |
Author(s)
Benedikt Zacher zacher@lmb.uni-muenchen.de
Examples
1 2 3 | ##
# dataPath <- system.file("extdata", package="Starr")
# transcriptAnno <- read.gffAnno(file.path(dataPath, "transcriptAnno.gff"), feature="transcript")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.