writeWIG: write ChIP-chip data to a *.wig file

In Starr: Simple tiling array analysis of Affymetrix ChIP-chip data

Description

This function writes the all columns of the assayData to a wiggle file.

Usage

writeWIG(expressionSet, probeAnno, file, chr=NULL, probeLength=NULL) 

Arguments

expressionSet	an ExpressionSet object
probeAnno	a probeAnno object
file	path to write to
chr	subset of chromosomes in probeAnno. If specified, only the subset is written to the file.
probeLength	length of the probes on the chip.

Author(s)

Benedikt Zacher [e-mail]

Starr documentation built on April 28, 2020, 7:52 p.m.